DNA Binding Motif

						

			
Accessions: M0155 (AthalianaCistrome v4_May2016)

			
Names: BAM8.ampDAP, T22029;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: arttsrCACGTGTsr
Weblogo: 
PSSM: P0      A      C      G      T
01    208    146    131    105      a
02    151    132    166    141      r
03     67    129    114    280      t
04    126     87     72    305      t
05     44    268    174    104      s
06    296      0    289      5      r
07      0    564      0     26      C
08    590      0      0      0      A
09      0    590      0      0      C
10      0      0    590      0      G
11      0      2      0    588      T
12      0      0    590      0      G
13     37     81     44    428      T
14     19    161    397     13      s
15    317      7    188     78      r
Binding TFs: T22029 (Glycosyl hydrolase family 14, Plant protein of unknown function (DUF822))
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.