DNA Binding Motif
| Accessions: | MA1833.1 (JASPAR 2024) |
| Names: | Zm00001d049364 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 16 |
| Consensus: | cgCcGCCGCCGCCrcc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2350 9280 4348 2628 c 02 2486 4638 9048 2434 g 03 1345 13507 2196 1558 C 04 3673 9771 2975 2187 c 05 711 1027 16187 681 G 06 352 17229 601 424 C 07 464 17025 607 510 C 08 652 366 17063 525 G 09 300 17272 593 441 C 10 465 17013 612 516 C 11 605 321 17121 559 G 12 416 16869 777 544 C 13 461 16513 1008 624 C 14 4800 2765 8879 2162 r 15 2247 9179 4110 3070 c 16 2100 9497 4550 2459 c |
| Type: | Heterodimer |
| Binding TFs: | B6TYT8 (AP2 domain) B6TYT8 |
| Binding Sites: | MA1833.1.1 MA1833.1.10 / MA1833.1.12 MA1833.1.11 / MA1833.1.13 MA1833.1.12 / MA1833.1.13 / MA1833.1.14 / MA1833.1.15 / MA1833.1.4 / MA1833.1.5 MA1833.1.14 / MA1833.1.16 MA1833.1.15 / MA1833.1.17 MA1833.1.16 / MA1833.1.18 MA1833.1.17 / MA1833.1.20 MA1833.1.18 MA1833.1.19 MA1833.1.2 / MA1833.1.3 MA1833.1.20 MA1833.1.3 / MA1833.1.4 MA1833.1.5 / MA1833.1.6 MA1833.1.6 MA1833.1.7 MA1833.1.8 MA1833.1.9 MA1833.1.1 MA1833.1.10 MA1833.1.11 MA1833.1.19 MA1833.1.2 MA1833.1.7 |
| Publications: | Buettner M., Singh K. B. Arabidopsis thaliana ethylene-responsive element binding protein (AtEBP), an ethylene-inducible, GCC box DNA-binding protein interacts with an ocs element binding protein. Proc. Natl. Acad. Sci. USA 94:5961-5966 (1997). [Pubmed] |
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