DNA Binding Motif

						

			
Accessions: PAX7_11 (HT-SELEX2 May2017)

			
Names: PAX7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: cgATTmGTCACGstt
Weblogo: 
PSSM: P0      A      C      G      T
01    202   1553    487    609      c
02    684    597   1503     67      g
03   2850    253    426    307      A
04     69    139     84   2850      T
05    102    271    221   2850      T
06   1269   2850    317     28      m
07      0      0   2850      3      G
08     76     73      0   2850      T
09     26   2850      5    566      C
10   2850      0     12      6      A
11     15   2850      0    365      C
12    183      0   2850      3      G
13     17   1290   1561     31      s
14    929    899    480   2850      t
15    671    642    710    827      t
Binding TFs: PAX7 (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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