DNA Binding Motif

						

			
Accessions: HOXA13_3 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sCTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   1145   2266   3045   1703      s
02    414   8159    758      0      C
03      0      0     28   8159      T
04      0   8159      0    111      C
05    599      0   8159      0      G
06      0      0     41   8159      T
07   8159      0      0    846      A
08   8159      3      0      0      A
09   8159     96      0      0      A
10   8159   2798    711   2678      a
11   1521   3307   1103   2228      y
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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