DNA Binding Motif

						

			
Accessions: RFX2_HUMAN.H10MO.C|M01482 (HOCOMOCO 10)

			
Names: RFX2
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: RFX-related factors{3.3.3}; RFX2{3.3.3.0.2}
Length: 22
Consensus: sssscsGTTGCCAkGGmrACsg
Weblogo: 
PSSM: P0      A      C      G      T
01     41    128    170     50      s
02     39    155    130     65      s
03     33    188    113     55      s
04     31    168    146     44      s
05     28    233     77     51      c
06     32    140    159     58      s
07      2      0    387      0      G
08      0     15      1    373      T
09      8     48      1    332      T
10     34      7    324     24      G
11      0    370      0     19      C
12      1    305      0     83      C
13    293     30     37     29      A
14     64     10    100    215      k
15     13      1    374      1      G
16     36     28    321      4      G
17    105    159     70     55      m
18    175     17    177     20      r
19    285     69     28      7      A
20     19    320     24     26      C
21     62    123    168     36      s
22     65     91    217     16      g
Binding TFs: RFX2_HUMAN (RFX DNA-binding domain, RFX1 transcription activation region      )
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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