DNA Binding Motif

						

			
Accessions: 1jt0_C (3D-footprint 20231221)

			
Names: HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION
Organisms: Staphylococcus aureus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a cooperative QacR-DNA complex
Length: 7
Consensus: ATAGACC
Weblogo: 
PSSM: P0      A      C      G      T
01     96      0      0      0      A
02      0      0      0     96      T
03     69      8     11      8      A
04      8      8     72      8      G
05     87      1      8      0      A
06      0     96      0      0      C
07      8     69     11      8      C
Binding TFs: 1jt0_C (Bacterial regulatory proteins, tetR family, QacR-like protein, C-terminal region)
Binding Sites: 1jt0_E / 1jt0_F
			
Publications: Schumacher M.A, Miller M.C, Grkovic S, Brown M.H, Skurray R.A, Brennan R.G. Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR. The EMBO journal 21:1210-8 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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