DNA Binding Motif

Accessions: NR2C1_methyl_2 (HT-SELEX2 May2017)
Names: NR2C1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: rrGGTCryGACCyy
Weblogo:
PSSM: P0 A C G T
01 891 310 1013 252 r
02 1413 28 1052 33 r
03 15 20 2465 182 G
04 26 22 2465 406 G
05 13 112 242 2465 T
06 64 2465 52 112 C
07 1525 0 940 1 r
08 14 891 0 1575 y
09 117 34 2465 29 G
10 2465 160 29 42 A
11 401 2465 9 45 C
12 252 2465 34 0 C
13 18 1031 16 1434 y
14 257 1071 324 814 y
Binding TFs: NR2C1 (Zinc finger, C4 type (two domains))
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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