DNA Binding Motif
| Accessions: | 6es2_K (3D-footprint 20231221) |
| Names: | Homeobox protein CDX-2 |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Structure of CDX2-DNA(CAA) |
| Length: | 7 |
| Consensus: | tTTatng |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13 13 14 56 t 02 6 6 6 78 T 03 1 1 2 92 T 04 63 13 10 10 a 05 20 20 20 36 t 06 24 24 24 24 n 07 13 14 56 13 g |
| Binding TFs: | 6es2_K (Homeobox domain) |
| Binding Sites: | 6es2_A 6es2_D |
| Publications: | Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J. Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife : (2018). [Pubmed] |
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