DNA Binding Motif

						

			
Accessions: M0665 (AthalianaCistrome v4_May2016)

			
Names: ANAC058.ampDAP, T14138;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: TwCKTGtdyhaCAmGtwA
Weblogo: 
PSSM: P0      A      C      G      T
01     68      4     52    451      T
02    171     35    101    268      w
03      6    569      0      0      C
04      0      0    172    403      K
05      0      0      0    575      T
06     42     54    443     36      G
07     88    138     34    315      t
08    144    108    155    168      d
09    129    162    113    171      y
10    145    161     77    192      h
11    317     38     97    123      a
12      0    408     52    115      C
13    573      1      1      0      A
14    348    226      1      0      m
15      0      2    545     28      G
16    120    125     57    273      t
17    251     99      8    217      w
18    479      2      4     90      A
Binding TFs: T14138 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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