DNA Binding Motif

						

			
Accessions: MA0727.2 (JASPAR 2024)

			
Names: NR3C2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: rGwACAywrTGTwCy
Weblogo: 
PSSM: P0      A      C      G      T
01  15033    226  26931    535      r
02     57      8  55731     60      G
03  17523   1377   6650  13654      w
04  30042     15     13      9      A
05      0  49953      5      0      C
06  33515     28   1053    221      A
07   7347  18273   3144  16489      y
08  17996   4833   8538  11062      w
09  22920   1933  14022   4023      r
10    401    996     22  43465      T
11      0      9  58888      0      G
12      4     23      3  44513      T
13  13789   7366   1346  18547      w
14     16  42687      9     83      C
15    560  25680    582  16504      y
Type: Heterodimer
Binding TFs: P08235 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P08235 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P08235
			
Publications: Sandelin A, Wasserman W.W. Prediction of nuclear hormone receptor response elements. Molecular endocrinology (Baltimore, Md.) 19:595-606 (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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