DNA Binding Motif

						

			
Accessions: ELK1_FOXI1_2_3_4_5 (HumanTF2 1.0)

			
Names: ELK1_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 16
Consensus: ammGGAAayrTAAAyA
Weblogo: 
PSSM: P0      A      C      G      T
01    435    134    206    124      a
02    299    385    256    110      m
03    301    641     82     50      m
04     16     18    641      0      G
05     47      5    641     29      G
06    641     17     21     50      A
07    641     26      3    103      A
08    311    101    138     91      a
09     97    178     79    287      y
10    324     34    317      7      r
11     84     27     35    641      T
12    481    160     16      0      A
13    641     13      0     47      A
14    641      0     26      8      A
15     10    426      0    215      y
16    641     20     63     21      A
Type: Heterodimer
Binding TFs: ELK1_TF2 (Ets-domain)
ELK1_Full (Ets-domain)
FOXI1_TF2 (Fork head domain)
ELK1_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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