DNA Binding Motif

						

			
Accessions: M0729 (AthalianaCistrome v4_May2016)

			
Names: NLP7.DAP, T19683;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wwwTGrCyyTTsrrd
Weblogo: 
PSSM: P0      A      C      G      T
01    266     65     70    194      w
02    203     77     98    217      w
03    178     53    109    255      w
04      6    108      1    480      T
05     39      0    556      0      G
06    196    104    202     93      r
07      0    595      0      0      C
08      0    264     24    307      y
09     11    232     13    339      y
10      6     48      0    541      T
11     23      9      0    563      T
12     59    281    192     63      s
13    238     67    247     43      r
14    182     73    209    131      r
15    206     73    167    149      d
Binding TFs: T19683 (PB1 domain, RWP-RK domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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