DNA Binding Motif

						

			
Accessions: MA1898.1 (JASPAR 2024)

			
Names: Meox
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 20
Consensus: wwwwwatTAATkAyywwwww
Weblogo: 
PSSM: P0      A      C      G      T
01    302    176    205    317      w
02    319    180    218    283      w
03    294    205    220    281      w
04    289    206    208    297      w
05    293    224    211    272      w
06    318    197    248    237      a
07    219    176    210    395      t
08     29     21     13    936      T
09    910     11     47     32      A
10    965      7     10     18      A
11     12     32      7    949      T
12     59     69    549    323      k
13    843     36     67     54      A
14    222    270    234    275      y
15    228    270    205    297      y
16    279    212    203    306      w
17    280    210    181    329      w
18    273    210    185    331      w
19    286    201    172    341      w
20    328    192    177    303      w
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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