DNA Binding Motif

						

			
Accessions: LEF1_2 (HT-SELEX2 May2017)

			
Names: LEF1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: asATCAAAg
Weblogo: 
PSSM: P0      A      C      G      T
01   5140   1237   1659   1171      a
02      0   2801   2339     90      s
03   5140     14     23    747      A
04    107      6      0   5140      T
05     48   5140    665      0      C
06   5140      0     20     33      A
07   5140    325      0    183      A
08   5140    137    554    795      A
09    424   1449   3691    234      g
Binding TFs: LEF1 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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