DNA Binding Motif

						

			
Accessions: TFAP2C_DLX3_2_3 (HumanTF2 1.0)

			
Names: TFAP2C_DLX3
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 22
Consensus: msCCybmrGsCaygcsymATTA
Weblogo: 
PSSM: P0      A      C      G      T
01    260    316    252    194      m
02    103    440    582     66      s
03      0   1022     70     11      C
04      5   1022     16    228      C
05     18    341    194    468      y
06     90    296    333    303      b
07    451    286    231     54      m
08    416     60    605      8      r
09     14     41   1022      7      G
10     55    510   1022     55      s
11      0   1022    203    187      C
12   1022    204    377    192      a
13    246    268     88    419      y
14    253    220    376    173      g
15    216    351    222    232      c
16    249    265    378    129      s
17    134    489     13    532      y
18    692    329    160    113      m
19   1022     91    107     22      A
20     44     44      5   1022      T
21     44     36    112   1022      T
22   1022     24    257    106      A
Type: Heterodimer
Binding TFs: DLX3_TF2 (Homeobox domain)
TFAP2C_TF1 (Transcription factor AP-2)
DLX3_Crystal (Homeobox domain)
DLX3_Full (Homeobox domain, Homeobox protein distal-less-like N terminal )
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.