DNA Binding Motif

						

			
Accessions: Alx4_DBD (HumanTF 1.0)

			
Names: Alx4
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 13
Consensus: mTAATywaATTAm
Weblogo: 
PSSM: P0      A      C      G      T
01   3777   3624   2119   2915      m
02   3027   1080    272  12435      T
03  12435    179   1090    975      A
04  12435     23     33     15      A
05    936   2495    370  12435      T
06    782   4906   1532   7529      y
07   4169   2828   2114   3324      w
08   9406   1732   3029    597      a
09  12435    462   1024    383      A
10     20     64     11  12435      T
11   1913   1824    183  12435      T
12  12435    214    563   1402      A
13   4303   3227   2407   2498      m
Binding TFs: Alx4_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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