DNA Binding Motif
Accessions: | 1rpe_LR (3D-footprint 20231221) |
Names: | PROTEIN (434 REPRESSOR) |
Organisms: | Phage 434 |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Description: | THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION |
Length: | 16 |
Consensus: | AAmAAgnnnnATTGTA |
Weblogo: | |
PSSM: | P0 A C G T 01 96 0 0 0 A 02 96 0 0 0 A 03 52 28 4 12 m 04 96 0 0 0 A 05 96 0 0 0 A 06 9 14 62 11 g 07 24 24 24 24 n 08 24 24 24 24 n 09 24 24 24 24 n 10 24 24 24 24 n 11 78 9 9 0 A 12 0 0 0 96 T 13 0 0 0 96 T 14 4 9 81 2 G 15 0 0 0 96 T 16 81 4 4 7 A |
Binding TFs: | 1rpe_L / 1rpe_R (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain) |
Binding Sites: | 1rpe_A 1rpe_B |
Publications: | Shimon L.J, Harrison S.C. The phage 434 OR2/R1-69 complex at 2.5 A resolution. Journal of molecular biology 232:826-38 (1993). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.