DNA Binding Motif

						

			
Accessions: MA1702.1 (JASPAR 2024)

			
Names: Pdp1
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: wrTTATGYAAyw
Weblogo: 
PSSM: P0      A      C      G      T
01   1468    759   1141   1448      w
02   1848    765   1362    841      r
03    126     46     64   4580      T
04    110     49    119   4538      T
05   4468     35    218     95      A
06    109    340     74   4293      T
07    331     76   4221    188      G
08    154   3282     79   1301      Y
09   4598     88     71     59      A
10   4606     60     68     82      A
11    914   1263    694   1945      y
12   1407   1183    802   1424      w
Type: Heterodimer
Binding TFs: Q24217 (bZIP transcription factor, Basic region leucine zipper)
Q24217
Binding Sites: MA1702.1.1
MA1702.1.10
MA1702.1.11
MA1702.1.12
MA1702.1.13
MA1702.1.14
MA1702.1.15
MA1702.1.16
MA1702.1.17
MA1702.1.18
MA1702.1.19
MA1702.1.2
MA1702.1.20
MA1702.1.3
MA1702.1.4
MA1702.1.5
MA1702.1.6
MA1702.1.7
MA1702.1.8
MA1702.1.9
			
Publications: Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.