DNA Binding Motif

						

			
Accessions: ZIC1_methyl_3 (HT-SELEX2 May2017)

			
Names: ZIC1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: krCCCCCTGCTGTGm
Weblogo: 
PSSM: P0      A      C      G      T
01   1058   6155  12534   8540      k
02  17636   2944   9192      0      r
03   1214  27117      0    105      C
04   3022  25816     10    512      C
05   5899  20866      0   2539      C
06      0  28295      0      0      C
07   2026  26941      4      0      C
08      0   6300      0  22011      T
09   3788      0  26205      0      G
10      0  27515      0   1788      C
11     97   2246   4875  23730      T
12      0      0  28316      0      G
13   2535      0      0  26429      T
14      0      0  25806   4372      G
15  10123  12282    887   4996      m
Binding TFs: ZIC1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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