DNA Binding Motif

						

			
Accessions: M0648 (AthalianaCistrome v4_May2016)

			
Names: T05369;, VND4.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CkTraaawwyAmGCA
Weblogo: 
PSSM: P0      A      C      G      T
01     41    559      0      0      C
02      0      0    343    257      k
03      0      0      0    600      T
04    311     39    241      9      r
05    308    101     72    119      a
06    306     72    114    108      a
07    259     95    113    133      a
08    223    126     57    194      w
09    258     59     88    195      w
10     35    300     92    173      y
11    599      1      0      0      A
12    324    276      0      0      m
13      1      0    568     31      G
14     15    458      6    121      C
15    449     26      1    124      A
Binding TFs: T05369 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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