DNA Binding Motif

Accessions: M0069 (AthalianaCistrome v4_May2016)
Names: ERF3.DAP, T01708;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: ygrCGGCGGmGrhgg
Weblogo:
PSSM: P0 A C G T
01 125 150 15 306 y
02 104 17 370 105 g
03 238 2 346 10 r
04 8 569 0 19 C
05 0 0 596 0 G
06 4 9 582 1 G
07 0 560 0 36 C
08 1 0 568 27 G
09 27 60 503 6 G
10 185 333 9 69 m
11 35 18 502 41 G
12 154 63 318 61 r
13 180 164 67 185 h
14 115 45 303 133 g
15 136 63 319 78 g
Binding TFs: T01708 (AP2 domain)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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