DNA Binding Motif

						

			
Accessions: M0615 (AthalianaCistrome v4_May2016)

			
Names: At1g74840.ampDAP, T00193;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: wwyyTTATCCAwww
Weblogo: 
PSSM: P0      A      C      G      T
01    275     87     69    154      w
02    251     40     83    211      w
03     94    211     90    190      y
04    142    207     72    164      y
05     25     16      1    543      T
06      0      0      0    585      T
07    585      0      0      0      A
08      0      0      0    585      T
09      0    585      0      0      C
10      0    576      0      9      C
11    480      2     65     38      A
12    187    102     28    268      w
13    250     14     10    311      w
14    238     56     17    274      w
Binding TFs: T00193 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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