DNA Binding Motif

						

			
Accessions: M0460 (AthalianaCistrome v4_May2016)

			
Names: HSFA1E.ampDAP, T11326;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: aGAAgcTTCTAGAAg
Weblogo: 
PSSM: P0      A      C      G      T
01    305     31    109     16      a
02      5      0    455      1      G
03    455      0      6      0      A
04    433      2     12     14      A
05     57     92    271     41      g
06     97    194     94     76      c
07     57     15      5    384      T
08     18      0      5    438      T
09      1    445     15      0      C
10     22     39      6    394      T
11    393     18     50      0      A
12      1      3    452      5      G
13    451      3      3      4      A
14    357     14     40     50      A
15     88     88    195     90      g
Binding TFs: T11326 (HSF-type DNA-binding)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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