DNA Binding Motif

						

			
Accessions: TEAD4_PITX1_2_3 (HumanTF2 1.0)

			
Names: TEAD4_PITX1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 18
Consensus: rCATwCywrhvyTAATCy
Weblogo: 
PSSM: P0      A      C      G      T
01    103     13    129     15      r
02     44    231      0      5      C
03    231      5     16      2      A
04      0     19      0    231      T
05     82      0     29    150      w
06     24    231     37     16      C
07     18    159      1     72      y
08     90     28     15     98      w
09     60     56     68     48      r
10     58     65     51     58      h
11     61     70     82     19      v
12     12    111     29     79      y
13      7      0     12    231      T
14    231      6     30     17      A
15    231      9     15      1      A
16     16     19     43    231      T
17     34    231      0     25      C
18      7    231     19     92      y
Type: Heterodimer
Binding TFs: PITX1_TF1 / PITX1_TF2 (Homeobox domain)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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