DNA Binding Motif

						

			
Accessions: YY1_methyl_2 (HT-SELEX2 May2017)

			
Names: YY1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 23
Consensus: cgCCATyTTkGrCrwwwhGTGCt
Weblogo: 
PSSM: P0      A      C      G      T
01    842   2366   1200    739      c
02   1561    224   4354   1601      g
03    863   4952     35    107      C
04      0   5147      0      1      C
05   5143     24      1      0      A
06      1      3      1   5146      T
07    596   2299    530   2633      y
08     11      1    508   4954      T
09      0      0      5   5147      T
10    269      5   2582   4753      k
11   1347     81   4700    773      G
12   2153    126   2855    645      r
13     48   4711    737   1285      C
14   1785    595   1545   1221      r
15   1955    457    818   1917      w
16   2313    485    540   2432      w
17   1668    520    588   2370      w
18   1916   2017    581   2782      h
19    875     39   4864     63      G
20     24      2      8   5143      T
21      1      1   5147      0      G
22     70   5045    211    520      C
23    240   1577    470   4759      t
Binding TFs: YY1 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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