DNA Binding Motif

						

			
Accessions: HSF4_methyl_1 (HT-SELEX2 May2017)

			
Names: HSF4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: rGAAyrTtCyrGaac
Weblogo: 
PSSM: P0      A      C      G      T
01   5308    262   6261    381      r
02     41    175  12212    124      G
03  12212   1290    228   1509      A
04  12212    593    623   2073      A
05   1457   5546   1946   3262      y
06   4520   1772   4599   1321      r
07   3511    899    902  12212      T
08   3552    388   3093  12212      t
09    117  12212    120      3      C
10    154   5871     83   6341      y
11   6512    128   5700    278      r
12     46    314  12212    139      G
13  12212   2899    444   2883      a
14  12212   1755   1694   4179      a
15   2974   3249   2992   2997      c
Binding TFs: HSF4 (HSF-type DNA-binding)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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