DNA Binding Motif

						

			
Accessions: 1cma_AB (3D-footprint 20231221)

			
Names: PROTEIN (MET REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: MET REPRESSOR/DNA COMPLEX + S-ADENOSYL-METHIONINE
Length: 7
Consensus: kGannTC
Weblogo: 
PSSM: P0      A      C      G      T
01     12     12     48     24      k
02      0      0     96      0      G
03     60     12     12     12      a
04     24     24     24     24      n
05     24     24     24     24      n
06      0      0      0     96      T
07      0     96      0      0      C
Binding TFs: 1cma_A / 1cma_B (Met Apo-repressor, MetJ)
Binding Sites: 1cma_C
1cma_D
			
Publications: Somers WS., Phillips SE. Crystal structure of the met repressor-operator complex at 2.8 A resolution reveals DNA recognition by beta-strands. Nature. 359(6394):387-93 (1992). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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