DNA Binding Motif

						

			
Accessions: MA0350.2 (JASPAR 2024)

			
Names: TOD6
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: asCTCATCGc
Weblogo: 
PSSM: P0      A      C      G      T
01    649     50     96    203      a
02     67    396    436     98      s
03     20    784    193      1      C
04      2     29     46    921      T
05      2    991      2      3      C
06    975      0      1     21      A
07      1      1     18    978      T
08      0    978      1     18      C
09     52     19    869     57      G
10    135    655    186     22      c
Type: Heterodimer
Binding TFs: P34219 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
P34219
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.