DNA Binding Motif

						

			
Accessions: Hoxd13_DBD_1 (HumanTF 1.0)

			
Names: Hoxd13
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 10
Consensus: syaATAAAah
Weblogo: 
PSSM: P0      A      C      G      T
01    304   2106   1227    241      s
02    170   2106      0   1676      y
03   2106    523      0    480      a
04   2106      0      6    100      A
05      0      1      4   2106      T
06   2106     12     55    278      A
07   2106      0      0     42      A
08   2106     52      2     22      A
09   2106    582    165    417      a
10    730    640    183    554      h
Binding TFs: Hoxd13_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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