DNA Binding Motif

						

			
Accessions: 6ht5_E (3D-footprint 20231221)

			
Names: POU domain, class 5, transcription factor 1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Oct4/Sox2:UTF1 structure
Length: 5
Consensus: tATgC
Weblogo: 
PSSM: P0      A      C      G      T
01     13     13     13     57      t
02     96      0      0      0      A
03      0      0      0     96      T
04     13     13     57     13      g
05      0     96      0      0      C
Binding TFs: 6ht5_E (Pou domain - N-terminal to homeobox domain)
Binding Sites: 6ht5_A
6ht5_B
			
	
			


			

				

				
				
				
				

			

			

		

	
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