DNA Binding Motif

						

			
Accessions: RHOXF1_full_1 (HumanTF 1.0)

			
Names: RHOXF1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 9
Consensus: gGmTwATCC
Weblogo: 
PSSM: P0      A      C      G      T
01    558    553   1651    198      g
02     73    193   1651    239      G
03   1060    591     11    110      m
04     26     58     43   1651      T
05    695    248    203    504      w
06   1651      4      0     85      A
07    119      0    408   1243      T
08      0   1651     68     72      C
09     65   1651     82    173      C
Binding TFs: RHOXF1_full (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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