DNA Binding Motif

Accessions: MA1743.2 (JASPAR 2024)
Names: BZIP2
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 13
Consensus: wGcTGACGTGGCa
Weblogo:
PSSM: P0 A C G T
01 265 57 101 577 w
02 26 2 789 183 G
03 219 604 152 24 c
04 75 77 0 848 T
05 0 127 803 70 G
06 1000 0 0 0 A
07 0 991 0 9 C
08 2 3 995 0 G
09 0 0 0 1000 T
10 0 0 1000 0 G
11 0 0 783 217 G
12 202 788 2 9 C
13 639 111 134 116 a
Type: Heterodimer
Binding TFs: Q9SI15 (bZIP transcription factor, Basic region leucine zipper)
Q9SI15
Publications: Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed]

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