DNA Binding Motif

						

			
Accessions: 4cn2_C (3D-footprint 20231221)

			
Names: RETINOIC ACID RECEPTOR RXR-ALPHA
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human Ramp2 Response Element
Length: 5
Consensus: tGamC
Weblogo: 
PSSM: P0      A      C      G      T
01     10     10     12     64      t
02      0      0     96      0      G
03     53     10     10     23      a
04     32     64      0      0      m
05      0     96      0      0      C
Binding TFs: 4cn2_C (Zinc finger, C4 type (two domains))
Binding Sites: 4cn2_A
4cn2_B
			
Publications: Osz J, McEwen A.G, Poussin-Courmontagne P, Moutier E, Birck C, Davidson I, Moras D, Rochel N. Structural basis of natural promoter recognition by the retinoid X nuclear receptor. Scientific reports 5:8216 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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