DNA Binding Motif

						

			
Accessions: USF2_HUMAN.H10MO.A|M01592 (HOCOMOCO 10)

			
Names: USF2
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: bHLH-ZIP factors{1.2.6}; USF factors{1.2.6.2}
Length: 19
Consensus: ggGTCACGTGrssvsssss
Weblogo: 
PSSM: P0      A      C      G      T
01    108    104    224     64      g
02    102     70    273     55      g
03     58      8    432      2      G
04      8     24     18    450      T
05      1    499      0      0      C
06    496      0      2      2      A
07      0    463     11     26      C
08     51      0    449      0      G
09      2      4      2    492      T
10      1      0    498      1      G
11    169     84    198     49      r
12     30    224    133    113      s
13     60    232    167     41      s
14    126    149    165     60      v
15     64    185    183     68      s
16     63    165    192     80      s
17     81    163    194     62      s
18     64    189    157     90      s
19     61    137    193    109      s
Binding TFs: USF2_HUMAN (Helix-loop-helix DNA-binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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