DNA Binding Motif

						

			
Accessions: GATA3_HUMAN.H10MO.C|M01175 (HOCOMOCO 10)

			
Names: GATA3
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: GATA-type zinc fingers{2.2.1}; Two zinc-finger GATA factors{2.2.1.1}
Length: 11
Consensus: wsWGATAAraw
Weblogo: 
PSSM: P0      A      C      G      T
01    207     50     79    164      w
02    117    159    169     55      s
03    365      6      3    126      W
04      2      1    497      0      G
05    496      2      0      2      A
06      7      4      1    488      T
07    443      3      8     46      A
08    398     27     48     27      A
09    167    115    170     48      r
10    296     59    102     43      a
11    212     43     48    197      w
Binding TFs: GATA3_HUMAN (GATA zinc finger)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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