DNA Binding Motif

						

			
Accessions: MA1766.1 (JASPAR 2024)

			
Names: MYB17
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: yyyACCTACCwwhww
Weblogo: 
PSSM: P0      A      C      G      T
01 70.053 439.58 77.058 413.31      y
02    135    368 61.296    436      y
03    102    609 10.508    278      y
04    996      0      0  3.503      A
05    130    870      0      0      C
06      0   1000      0      0      C
07    242  40.28      0    718      T
08   1000      0      0      0      A
09    128    865  5.254  1.751      C
10  1.751    806      0    193      C
11    545    117 22.767    315      w
12    420    247 57.793    275      w
13    305    336 96.322    263      h
14    315    228    102    356      w
15    292    210 98.074    399      w
Type: Heterodimer
Binding TFs: Q9M2D9 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9M2D9
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.