DNA Binding Motif

						

			
Accessions: HOXD10_methyl_5 (HT-SELEX2 May2017)

			
Names: HOXD10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: rGTCGTAAAAh
Weblogo: 
PSSM: P0      A      C      G      T
01   1492    912   1782    556      r
02   1166    102   4742      0      G
03     41     68      0   4742      T
04      0   4742      0      0      C
05    247      0   4742      0      G
06      0     19      0   4742      T
07   4742      0      0    224      A
08   4742     10      0      0      A
09   4742     32     14      9      A
10   4742    428    211    754      A
11   1352   1461    454   1475      h
Binding TFs: HOXD10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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