DNA Binding Motif

						

			
Accessions: MA1005.1 (JASPAR 2024)

			
Names: ERF3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: CGCCGcCr
Weblogo: 
PSSM: P0      A      C      G      T
01     80    760     80     80      C
02     14      0    985      0      G
03      0    885    114      0      C
04      0    985     14      0      C
05     14      0    985      0      G
06     57    643    186    114      c
07     79    904      0     16      C
08    581     23    279    116      r
Type: Heterodimer
Binding TFs: O80339 (AP2 domain)
O80339
Binding Sites: MA1005.1.5
MA1005.1.11
MA1005.1.10
MA1005.1.12
MA1005.1.16
MA1005.1.13
MA1005.1.20
MA1005.1.14
MA1005.1.17 / MA1005.1.19
MA1005.1.4 / MA1005.1.6
MA1005.1.2
MA1005.1.3 / MA1005.1.7
MA1005.1.8
MA1005.1.1
MA1005.1.15
MA1005.1.18
MA1005.1.9
			
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.