DNA Binding Motif

						

			
Accessions: M0466 (AthalianaCistrome v4_May2016)

			
Names: LBD18.ampDAP, T08045;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CggaWTTTccGSmrr
Weblogo: 
PSSM: P0      A      C      G      T
01     16    581      0      0      C
02    122     40    298    137      g
03     65     92    329    111      g
04    273     56    135    133      a
05    157      1     25    414      W
06     70     24      8    495      T
07     49     90      2    456      T
08     54     99     21    423      T
09    126    351     86     34      c
10    101    357     43     96      c
11      0      0    597      0      G
12      1    171    425      0      S
13    222    221     63     91      m
14    199     44    278     76      r
15    265     83    162     87      r
Binding TFs: T08045 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.