DNA Binding Motif

						

			
Accessions: NR5A2_MOUSE.H10MO.A|M01266 (HOCOMOCO 10)

			
Names: Nr5a2
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: FTZ-F1-related receptors (NR5){2.1.5}; LRH-1 (NR5A2){2.1.5.0.2}
Length: 11
Consensus: yyCAAGGyCAs
Weblogo: 
PSSM: P0      A      C      G      T
01     52    131    112    205      y
02     30    176     13    281      y
03      1    472     22      5      C
04    490      4      1      5      A
05    485      1     11      3      A
06     13      0    487      0      G
07      2      0    498      0      G
08     38    181     23    258      y
09     11    401      9     79      C
10    381     20     51     48      A
11    101    150    160     89      s
Binding TFs: NR5A2_MOUSE (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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