DNA Binding Motif

						

			
Accessions: ZSCAN4_methyl_1 (HT-SELEX2 May2017)

			
Names: ZSCAN4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: syGCACACmCTGamAah
Weblogo: 
PSSM: P0      A      C      G      T
01  12435  16266  14337   7012      s
02   6273  20718   2848  25363      y
03  10842     20  45351      0      G
04      2  50035      4     30      C
05  50041      0     34      0      A
06      0  50048     12      6      C
07  50036     24     14      2      A
08    151  49162    127   2000      C
09  20507  29297    354    486      m
10    214  49966     12     18      C
11    653     75    137  49869      T
12    243   2586  47532   3591      G
13  34683  11084   6051   9688      a
14  38832  31592    181    378      m
15  49997     61   4785     45      A
16  33598  10570   8778   6466      a
17  14647  13274   5095  17034      h
Binding TFs: ZSCAN4 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.