DNA Binding Motif

						

			
Accessions: HOXC10_EOMES (HumanTF2 1.0)

			
Names: HOXC10_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: TmaCACcTCrTaAa
Weblogo: 
PSSM: P0      A      C      G      T
01     33     37     10    266      T
02    114    151     49     29      m
03    266     33     70     33      a
04     18    266      0      3      C
05    266      0     32      0      A
06      0    266     65      0      C
07     53    223     56     43      c
08     15     67      4    199      T
09     61    205      0     18      C
10    146     25    119      4      r
11      2      6      0    266      T
12    196     30     14     69      a
13    266     50      5     41      A
14    266     80     31    113      a
Type: Heterodimer
Binding TFs: EOMES_TF2 (T-box)
HOXC10_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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