DNA Binding Motif

						

			
Accessions: GATA5_4 (HT-SELEX2 May2017)

			
Names: GATA5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: hGATAAsrATCt
Weblogo: 
PSSM: P0      A      C      G      T
01    166     96      6     96      h
02      3      0    262      2      G
03    262      4      0      3      A
04      0      3      2    262      T
05    262      5      4     59      A
06    262      4     48     12      A
07     63    262    174     54      s
08    108     29    262      6      r
09    262     21     15     20      A
10      6     20     27    262      T
11     30    262     18     18      C
12    106     28     69    262      t
Binding TFs: GATA5 (GATA zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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