DNA Binding Motif

						

			
Accessions: IRF5_4 (HT-SELEX2 May2017)

			
Names: IRF5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: cCGAAACCGAAACy
Weblogo: 
PSSM: P0      A      C      G      T
01   1606   3021   1475   1616      c
02    339   6588    119   1131      C
03    336     90   7719     90      G
04   7719    373    179    166      A
05   7719    176    354   1742      A
06   7719      4      8      9      A
07     93   7719    573    129      C
08    139   7719     26    509      C
09    326      4   7719     26      G
10   7719    200    108     47      A
11   7719     50    496   2023      A
12   7719      9     12     47      A
13    162   7719   1055    120      C
14    929   3401    612   4318      y
Binding TFs: IRF5 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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