DNA Binding Motif
| Accessions: | 5d5x_E (3D-footprint 20231221) |
| Names: | Putative transcription factor |
| Organisms: | Chaetomium thermophilum, strain DSM 1495 / CBS 144.50 / IMI 039719 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA |
| Length: | 6 |
| Consensus: | TGGCTG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 9 9 9 69 T 02 9 11 67 9 G 03 0 0 96 0 G 04 0 96 0 0 C 05 0 0 0 96 T 06 9 9 69 9 G |
| Binding TFs: | 5d5x_E (HSF-type DNA-binding) |
| Binding Sites: | 5d5x_A 5d5x_D |
| Publications: | Neudegger T, Verghese J, Hayer-Hartl M, Hartl FU, Bracher A. Structure of human heat-shock transcription factor 1 in complex with DNA. Nat Struct Mol Biol 23:140-6 (2016). [Pubmed] |
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