DNA Binding Motif
| Accessions: | NKX31_HUMAN.H10MO.C|M01377 (HOCOMOCO 10), NKX31_MOUSE.H10MO.C|M01248 (HOCOMOCO 10) |
| Names: | NKX3-1 |
| Organisms: | Homo sapiens, Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Notes: | NK-related factors{3.1.2}; NK-3{3.1.2.16} |
| Length: | 13 |
| Consensus: | wwTAAGTAtwtww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 24 1 2 16 w 02 22 4 2 15 w 03 2 3 0 38 T 04 42 1 0 0 A 05 39 2 0 2 A 06 4 1 33 5 G 07 0 0 0 43 T 08 36 2 5 0 A 09 8 7 2 26 t 10 23 2 4 14 w 11 9 8 6 20 t 12 20 2 8 13 w 13 18 6 4 15 w |
| Type: | Heterodimer |
| Binding TFs: | NKX31_MOUSE (Homeobox domain) NKX31_HUMAN (Homeobox domain) |
| Publications: | Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
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