DNA Binding Motif

						

			
Accessions: MA1532.1 (JASPAR 2024)

			
Names: NR1D2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: rGGTyAgTrkGTyAk
Weblogo: 
PSSM: P0      A      C      G      T
01    738    121    917     62      r
02     36      1   1655    557      G
03     43      4   1655     56      G
04      5     92    470   1655      T
05     61   1655     23   2518      y
06   1655      0     29     91      A
07    236    299    865    255      g
08     69    128    191   1655      T
09    765     34    890     40      r
10     14      0   1655    797      k
11     40      4   1655     17      G
12    136    125    268   1655      T
13     32   1655    134    662      y
14   1655     18    554     94      A
15    390    278    457    530      k
Type: Heterodimer
Binding TFs: Q14995 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q14995 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q14995
			
Publications: Khan SA, Vanden Heuvel JP. Role of nuclear receptors in the regulation of gene expression by dietary fatty acids (review). J Nutr Biochem 14:554-67 (2003). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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