DNA Binding Motif

						

			
Accessions: UN0360.1 (JASPAR 2024)

			
Names: CDF5
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 10
Consensus: wtAAAAAGtr
Weblogo: 
PSSM: P0      A      C      G      T
01   1306    482    645   1388      w
02    826    900    926   1169      t
03   3821      0      0      0      A
04   3802      0      0     19      A
05   3820      0      0      1      A
06   3820      0      0      1      A
07   3821      0      0      0      A
08      0      0   3821      0      G
09    941    510    724   1646      t
10   1597    325    985    914      r
Type: Heterodimer
Binding TFs: Q9SEZ3 (Dof domain, zinc finger)
Q9SEZ3
Binding Sites: UN0360.1.1
UN0360.1.10
UN0360.1.11 / UN0360.1.5
UN0360.1.12
UN0360.1.13
UN0360.1.14
UN0360.1.15
UN0360.1.16
UN0360.1.17
UN0360.1.18
UN0360.1.19
UN0360.1.2
UN0360.1.20
UN0360.1.3
UN0360.1.4
UN0360.1.6
UN0360.1.7
UN0360.1.8
UN0360.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.