DNA Binding Motif
| Accessions: | MA0079.5 (JASPAR 2024) |
| Names: | SP1 |
| Organisms: | Homo sapiens, Rattus norvegicus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 9 |
| Consensus: | GGGGMGGrG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1.05 1.05 950 47 G 02 1.05 1.05 997 1.05 G 03 1.05 1.05 997 1.05 G 04 1.05 1.05 997 1.05 G 05 267 731 1.05 1.05 M 06 1.05 1.05 997 1.05 G 07 1.05 85.443 912 1.05 G 08 254 52 659 35 r 09 161 1.05 836 1.05 G |
| Type: | Heterodimer |
| Binding TFs: | P08047 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) P08047 |
| Publications: | Raiber EA, Kranaster R, Lam E, Nikan M, Balasubramanian S. A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro. Nucleic Acids Res 40:1499-508 (2012). [Pubmed] |
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