DNA Binding Motif

Accessions: EEAD0161 (EEADannot 2025-01-07)
Names: TGACcore
Organisms: Oryza sativa
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 4
Consensus: TGAC
Weblogo:
PSSM: P0 A C G T
01 0 0 0 2 T
02 0 0 2 0 G
03 2 0 0 0 A
04 0 2 0 0 C
Binding TFs: OsBLH4 (Homeobox domain, Homeobox KN domain, Associated with HOX)
Publications: Cao C, Guo S, Deng P, Yang S, Xu J, Hu T, Hu Z, Chen D, Zhang H, Navea IP, Chin JH, Zhang W, Jing W. The BEL1-like homeodomain protein OsBLH4 regulates rice plant height, grain number, and heading date by repressing the expression of OsGA2ox1. Plant J 119:1369-1385 (2024). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.